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使用awk在同一文件中排序多个表-Orderingseveraltablesinthesamefileusingawk

Inmyworkflow,filescontainingsimpletableswithatwo-lineheader(seeendofpost)arecreated.

In my workflow, files containing simple tables with a two-line header (see end of post) are created. I want to order these tables by number using:

在我的工作流程中,创建了包含带有两行标题的简单表的文件(请参阅结尾)。我想用数字来命令这些表:

(head -n 2 && tail -n +3 | sort -n -r) > ordered.txt

That works fine, but I don't know how to split the file so that I can order every table and print it in ONE file. My approach is:

这工作正常,但我不知道如何拆分文件,以便我可以订购每个表并将其打印在一个文件中。我的方法是:

awk '/^TARGET/ {(head -n 2 && tail -n +3 | sort -n -r) >> ordered.txt}' output.txt

However, this causes an error message. I want to avoid any intermediate output files. What is missing in my awk command?

但是,这会导致错误消息。我想避免任何中间输出文件。我的awk命令缺少什么?

The input files look like that:

输入文件如下所示:

TARGET  1
Sample1 Sample2 Sample3 Pattern
3   3   3   z..........................Z........................................z.........Z...z
147 171 49  Z..........................Z........................................Z.........Z...Z
27  28  13  z..........................Z........................................z.........z...z
75  64  32  Z..........................Z........................................Z.........z...Z

TARGET  2
Sample1 Sample2 Sample3 Pattern
2   0   1   z..........................z........................................z.........Z...Z
21  21  7   z..........................Z........................................Z.........Z...Z
1   0   0   ...........................Z........................................Z.............Z
4   8   6   Z..........................Z........................................z.........Z...z
2   0   1   Z..........................Z........................................Z.........Z....
1   0   0   z..........................Z........................................Z.............Z
1   0   0   z...................................................................Z.........Z...Z

TARGET  3
Sample1 Sample2 Sample3 Pattern
1   0   0   z..........................Z........................................z.............z
1   3   0   z..........................z........................................Z.........Z...Z
1   1   0   Z..........................Z........................................Z.............z
1   0   0   Z..........................Z........................................Z.............Z
0   1   2   ...........................Z........................................Z.........Z...Z
0   0   1   z..........................z........................................z..............

My output should like that - no dropping of any line:

我的输出应该是这样的 - 不丢弃任何行:

    TARGET  1
Sample1 Sample2 Sample3 Pattern
147 171 49  Z..........................Z........................................Z.........Z...Z
75  64  32  Z..........................Z........................................Z.........z...Z
27  28  13  z..........................Z........................................z.........z...z
3   3   3   z..........................Z........................................z.........Z...z

TARGET  2
Sample1 Sample2 Sample3 Pattern
21  21  7   z..........................Z........................................Z.........Z...Z
4   8   6   Z..........................Z........................................z.........Z...z
2   0   1   z..........................z........................................z.........Z...Z
2   0   1   z..........................z........................................z.........Z...Z
1   0   0   ...........................Z........................................Z.............Z
1   0   0   ...........................Z........................................Z.............Z
1   0   0   ...........................Z........................................Z.............Z

TARGET  3
Sample1 Sample2 Sample3 Pattern
1   0   0   z..........................Z........................................z.............z
1   0   0   z..........................Z........................................z.............z
1   0   0   z..........................Z........................................z.............z
1   0   0   z..........................Z........................................z.............z
0   1   2   ...........................Z........................................Z.........Z...Z
0   0   1   z..........................z........................................z..............

2 个解决方案

#1


1  

requires GNU awk for the array traversal sorting:

需要GNU awk进行数组遍历排序:

gawk '
    BEGIN {PROCINFO["sorted_in"] = "@val_num_asc"} 
    function output_table() {
        for (key in table) print table[key]
        delete table
        i=0
    }
    /TARGET/ {print; getline; print; next} 
    /^$/ {output_table(); print; next} 
    {table[++i] = $0} 
    END {output_table()}
' file

outputs

输出

TARGET  1
Sample1 Sample2 Sample3 Pattern
3   3   3   z..........................Z........................................z.........Z...z
27  28  13  z..........................Z........................................z.........z...z
75  64  32  Z..........................Z........................................Z.........z...Z
147 171 49  Z..........................Z........................................Z.........Z...Z

TARGET  2
Sample1 Sample2 Sample3 Pattern
1   0   0   ...........................Z........................................Z.............Z
1   0   0   z...................................................................Z.........Z...Z
1   0   0   z..........................Z........................................Z.............Z
2   0   1   Z..........................Z........................................Z.........Z....
2   0   1   z..........................z........................................z.........Z...Z
4   8   6   Z..........................Z........................................z.........Z...z
21  21  7   z..........................Z........................................Z.........Z...Z

TARGET  3
Sample1 Sample2 Sample3 Pattern
0   0   1   z..........................z........................................z..............
0   1   2   ...........................Z........................................Z.........Z...Z
1   0   0   Z..........................Z........................................Z.............Z
1   0   0   z..........................Z........................................z.............z
1   1   0   Z..........................Z........................................Z.............z
1   3   0   z..........................z........................................Z.........Z...Z

#2


1  

This is a bit of a mess but assuming you dont want to lose records when you sort this should work

这有点乱,但假设你不想丢失记录,当你排序这应该工作

 awk 'function sortit(){
           x=asort(a)
           for(i=1;i<=x;i++)print b[a[i]" "d[i]++]
           delete(a);delete(b);delete(c);delete(d)
     }                             
     /^[0-9]/{a[$0]=$1;b[$1" "c[$1]++]=$0}
     /TARGET/{print;getline;print}
     !NF{sortit();print}
     END(sortit()}' file

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